MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Microbacterium paludicola
19428wA4_P1012
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 127
bases: 3,293,562 bps
CDS: 3,068
rRNA: 3
Repeat region:
tmRNA: 1
tRNA: 52
misc RNA:
Total features: 3,124
Total number of protein coding genes annotated/found:
3,068
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Items 1 - 20
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5044|JADGLL010000009.1
SEQF5044_03124
Genome Viewer
NA
AA
972/324
80354-79383
1%2C4-dihydroxy-2-naphthoate octaprenyltransferase
SEQF5044|JADGLL010000009.1
SEQF5044_03123
Genome Viewer
NA
AA
372/124
78579-78950
hypothetical protein
SEQF5044|JADGLL010000009.1
SEQF5044_03122
Genome Viewer
NA
AA
399/133
78484-78086
hypothetical protein
SEQF5044|JADGLL010000009.1
SEQF5044_03121
Genome Viewer
NA
AA
1695/565
78084-76390
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase
SEQF5044|JADGLL010000009.1
SEQF5044_03120
Genome Viewer
NA
AA
867/289
76323-75457
Polyphosphate:AMP/ADP phosphotransferase
SEQF5044|JADGLL010000009.1
SEQF5044_03119
Genome Viewer
NA
AA
1104/368
75388-74285
Glycerate 2-kinase
SEQF5044|JADGLL010000009.1
SEQF5044_03118
Genome Viewer
NA
AA
1242/414
74283-73042
putative xylitol oxidase
SEQF5044|JADGLL010000009.1
SEQF5044_03117
Genome Viewer
NA
AA
1293/431
71498-72790
Isochorismate synthase MenF
SEQF5044|JADGLL010000009.1
SEQF5044_03116
Genome Viewer
NA
AA
543/181
71424-70882
hypothetical protein
SEQF5044|JADGLL010000009.1
SEQF5044_03115
Genome Viewer
NA
AA
828/276
70885-70058
Demethylmenaquinone methyltransferase
SEQF5044|JADGLL010000009.1
SEQF5044_03114
Genome Viewer
NA
AA
1029/343
70031-69003
Octaprenyl diphosphate synthase
SEQF5044|JADGLL010000009.1
SEQF5044_03113
Genome Viewer
NA
AA
1374/458
68932-67559
NADPH-ferredoxin reductase FprA
SEQF5044|JADGLL010000009.1
SEQF5044_03112
Genome Viewer
NA
AA
1566/522
65850-67415
ATP-dependent RNA helicase RhlE
SEQF5044|JADGLL010000009.1
SEQF5044_03111
Genome Viewer
NA
AA
1017/339
64463-65479
Ribose operon repressor
SEQF5044|JADGLL010000009.1
SEQF5044_03110
Genome Viewer
NA
AA
1710/570
62705-64414
Oligo-1%2C6-glucosidase
SEQF5044|JADGLL010000009.1
SEQF5044_03109
Genome Viewer
NA
AA
1251/417
62504-61254
Maltose/maltodextrin-binding periplasmic protein
SEQF5044|JADGLL010000009.1
SEQF5044_03108
Genome Viewer
NA
AA
1635/545
61154-59520
Maltose/maltodextrin transport system permease protein MalF
SEQF5044|JADGLL010000009.1
SEQF5044_03107
Genome Viewer
NA
AA
885/295
59520-58636
Maltose/maltodextrin transport system permease protein MalG
SEQF5044|JADGLL010000009.1
SEQF5044_03106
Genome Viewer
NA
AA
1329/443
58467-57139
hypothetical protein
SEQF5044|JADGLL010000009.1
SEQF5044_03105
Genome Viewer
NA
AA
1047/349
57117-56071
D-altritol 5-dehydrogenase
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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